plotAlignment: Tile plot

In GaelleLefort/ASICS: Automatic Statistical Identification in Complex Spectra

Description

Tile plot of spectra to see if an alignment is needed or the result of an alignment.

Usage

plotAlignment(spectra_obj, xlim = c(0, 10))

Arguments

spectra_obj	An object of class Spectra obtained with the function createSpectra.
xlim	Boundaries for x.

Value

A ggplot plot of original and reconstructed spectra of one sample in the same figure for ASICSResults object. In addition, one pure metabolite spectrum (as provided in the reference library) and the deformed one can be superimposed to the plot.

See Also

alignSpectra

Examples

# Import data and create object
current_path <- system.file("extdata", "example_spectra", package = "ASICS")
spectra_data <- importSpectraBruker(current_path)
spectra_obj <- createSpectra(spectra_data)
plotAlignment(spectra_obj, xlim = c(3,4))

GaelleLefort/ASICS documentation built on July 19, 2020, 2:08 p.m.