Files in Gavin-Yinld/csmFinder
Find putative cell-subset specific methylation (pCSM) loci in single-cell methylomes or bulk methylomes
.gitattributes
.gitignore
DESCRIPTION
NAMESPACE
R/Nonparametric_Bayesian_clustering.R
R/bismark2segment.R
R/csmFinder.R
R/find_candidate.R
R/merge_segment.R
R/run.beta.mixture.model.R
figures/csmFinder.gif
inst/bismark2segment.py
inst/extdata/CpG_plus.reference
inst/extdata/bulk_CpG_extract_file/demo.dataset.gz
inst/extdata/single_cell_CpG_extract_file/CpG_context_cell1.gz
inst/extdata/single_cell_CpG_extract_file/CpG_context_cell10.gz
inst/extdata/single_cell_CpG_extract_file/CpG_context_cell2.gz
inst/extdata/single_cell_CpG_extract_file/CpG_context_cell3.gz
inst/extdata/single_cell_CpG_extract_file/CpG_context_cell4.gz
inst/extdata/single_cell_CpG_extract_file/CpG_context_cell5.gz
inst/extdata/single_cell_CpG_extract_file/CpG_context_cell6.gz
inst/extdata/single_cell_CpG_extract_file/CpG_context_cell7.gz
inst/extdata/single_cell_CpG_extract_file/CpG_context_cell8.gz
inst/extdata/single_cell_CpG_extract_file/CpG_context_cell9.gz
inst/read_segment_for_beta_mixture.py
inst/read_segment_for_beta_mixture.v2.py
man/Nonparametric_Bayesian_clustering.Rd
man/bismark2segment.Rd
man/csmFinder.Rd
man/find_candidate.Rd
man/merge_segment.Rd
man/run.beta.mixture.model.Rd
readme.md
