pocket_experiment: Run an experiment on cluster

In Giappo/jappe: Jap

Description

Run an experiment on cluster

Usage

pocket_experiment(
  account = jap::your_account(),
  projects_folder_name = jap::default_projects_folder(),
  github_name = "Giappo",
  project_name = "sls",
  function_name = "sls_main",
  params,
  cluster_folder = jap::default_cluster_folder(),
  home_dir = jap::default_home_dir(),
  my_email = jap::default_my_email(),
  cluster_partition = "gelifes",
  jap_branch = "master",
  drive = jap::default_drive_choice(),
  delete_on_cluster = TRUE
)

Arguments

account	a peregrine account
projects_folder_name	the name you want to give to the folder containing all your projects
github_name	the github account name where the repo is
project_name	the name of the project
function_name	the name of the function
params	parameters for the function in the list format
cluster_folder	main folder on the cluster. It can be either 'home' or 'data'
home_dir	path to the home directory. On windows usually is a disk like C or D. On mac is always ~.
cluster_partition	A string, with name of partition in which to run the main job. Defaults to "gelifes", accepts "regular", "short" and remaining Peregrine partitions.
drive	do you want to use google drive to store the data of your prokects? It can be either TRUE or FALSE
delete_on_cluster	do you want to delete the files from the cluster after the download?

Value

nothing

Author(s)

Giovanni Laudanno

Giappo/jappe documentation built on Aug. 30, 2020, 2:41 p.m.