QMP | R Documentation |
The data containing quantitative microbiome count data of dimenstion 106 samples/subjects (in rows) and 91 OTUs (in columns). The raw dataset is pruned the taxa present less than 30% of samples and final dataset contains only healthy subjects from two cohorts: Study cohort and Disease cohort.
QMP
An object of class matrix
(inherits from array
) with 106 rows and 91 columns.
Yoon, Gaynanova and Müller (2019) Microbial Networks in SPRING - Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data. Frontiers in Genetics. 10:516. doi:10.3389/fgene.2019.00516
Vanderputte et al. (2017) Quantitative microbiome profiling links gut community variation to microbial load. Nature. 551: 507-511. doi:10.1038/nature24460
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