hzar.profile.dataGroup: Generate a likelihood profile for a single parameter

In GrahamDB/hzar: Hybrid Zone Analysis using R

Description

TODO

Usage

hzar.profile.dataGroup(dG, parameter, pVals = NULL, pDivs = NULL, nDiv =
20, appeture = NULL, doPar = FALSE, ...) 

Arguments

dG	A hzar.dataGroup of the fitted model
parameter	The name of the parameter to profile.
pVals	The parameter values at which to calculate the profile. Automatically sorted and reduced to unique values. If NULL, default to the midpoints of ranges specified by pDiv.
pDivs	A list of ranges of parameter values from the supplied hzar.dataGroup to use for initializing the profile fit. If numeric, e.g. c(0,1,2,4), treat as if a list of pairs of consequetive values, e.g. list(c(0,1),c(1,2),c(2,4)). If NULL, generate using pVals and appeture. If pVals is also NULL, generate using equal.count, with n = nDiv.
nDiv	The number of points at which to calculate the profile. Ignored if either pDivs or pVals are not NULL.
appeture	The maximum parameter delta from pVals to use for initializing the profile fit from the supplied hzar.dataGroup. Ignored if pDivs is not NULL or pVals is not numeric. If used and NULL, default to the median deviation between consecutive values of pVals.
doPar	Should %dopar% be used to construct fit requests in parallel?
...	Arguments to pass to hzar.multiFitRequest.

Details

This method does not actually do the fitting of the likelihood profile. See the example for a useable workflow.

Value

A list of hzar.fitRequest objects to be fitted.

Author(s)

Graham Derryberry [e-mail]

References

There is probably a reference to how to do this somewhere...

See Also

hzar.multiFitRequest hzar.dataGroup hzar.fitRequest hzar.doFit.multi hzar.make.obsDataGroup

Examples

##---- Should be DIRECTLY executable !! ----
##-- ==>  Define data, use random,
##--	or do  help(data=index)  for the standard data sets.

GrahamDB/hzar documentation built on Oct. 27, 2019, 2:20 a.m.