Files in GranderLab/ClusterSignificanceExtras
A package allowing re-creation of all figures in the publication associated with the ClusterSignificance package
.Rbuildignore
.gitignore
DESCRIPTION
NAMESPACE
R/data.R
R/generalTools.R
R/hematologicalCancers.R
R/matrixTools.R
R/sensitivitySpecificityTests.R
README.md
data/hematologicalCancers.rda
data/hundred.rda
data/overlapTable.rda
data/pcpPermutations.rda
data/sensitivitySpecificityTest.rda
data/zero.rda
docs/authors.html
docs/index.html
docs/jquery.sticky-kit.min.js
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/reference/MultipleAssignment.html
docs/reference/MultipleAssignmentHelper.html
docs/reference/addOnePoint.html
docs/reference/calculateOverlap.html
docs/reference/checkIdenticalDims.html
docs/reference/checkIdenticalMatrix.html
docs/reference/checkIdenticalPoints.html
docs/reference/dynamicXY.html
docs/reference/extendToMatch.html
docs/reference/g.html
docs/reference/hemCancData.html
docs/reference/hematologicalCancers.html
docs/reference/hundred.html
docs/reference/index.html
docs/reference/interspersion.html
docs/reference/lncGenes.html
docs/reference/makeGroups.html
docs/reference/makeMatrix.html
docs/reference/matrixTests.html
docs/reference/normalMDS.html
docs/reference/overlapMatrices.html
docs/reference/overlapProbability.html
docs/reference/overlapTable.html
docs/reference/parallelCS.html
docs/reference/pcpPermutations.html
docs/reference/pe.html
docs/reference/permMatrix.html
docs/reference/sensSpecPlot-2.png
docs/reference/sensSpecPlot.html
docs/reference/sensitivityTest.html
docs/reference/sensitivityTestResults.html
docs/reference/specificityTest.html
docs/reference/specificityTestResults.html
docs/reference/tsnePlots.html
docs/reference/visualizeOverlaps-3.png
docs/reference/visualizeOverlaps.html
docs/reference/zero.html
docs/reference/zeroOrHundred.html
inst/Fig1_exampleData/Figure1exampleData.Rmd
inst/Fig1_exampleData/Figure1exampleData.html
inst/SuppFig1_sensiticitySpecificityTests/sensSpecTesting.Rmd
inst/SuppFig2_hematologicalCancers/hematologicalCancers.Rmd
man/MultipleAssignment.Rd
man/MultipleAssignmentHelper.Rd
man/addOnePoint.Rd
man/calculateOverlap.Rd
man/checkIdenticalDims.Rd
man/checkIdenticalMatrix.Rd
man/checkIdenticalPoints.Rd
man/dynamicXY.Rd
man/extendToMatch.Rd
man/g.Rd
man/hemCancData.Rd
man/hematologicalCancers.Rd
man/hundred.Rd
man/interspersion.Rd
man/lncGenes.Rd
man/makeGroups.Rd
man/makeMatrix.Rd
man/matrixTests.Rd
man/normalMDS.Rd
man/overlapMatrices.Rd
man/overlapProbability.Rd
man/overlapTable.Rd
man/parallelCS.Rd
man/pcpPermutations.Rd
man/pe.Rd
man/permMatrix.Rd
man/sensSpecPlot.Rd
man/sensitivityTest.Rd
man/sensitivityTestResults.Rd
man/specificityTest.Rd
man/specificityTestResults.Rd
man/tsnePlots.Rd
man/visualizeOverlaps.Rd
man/zero.Rd
man/zeroOrHundred.Rd
tests/testthat.R
tests/testthat/test.matrixTools.R
