plotFit: Plot the fit for standards and the samples

In Greenhouse-Lab/lumfit: Luminex Data Processing

Description

Produces a plot that includes points for standards, proposed fit, removed outliers, bounds for "flat" portions of the curve, and values for samples and for the background.

Usage

plotFit(xvar, yvar, std, fitpar = NULL, FUNmod = NULL, iout = NULL,
  bg = NULL, smp = NULL, smpflag = NULL, trimval = NULL,
  trimext = NULL, ptcol = "firebrick3", rugcols = c("cadetblue",
  "purple", "red"), ...)

Arguments

xvar	character strings for the variables used to fit a standard curve.
yvar	character strings for the variables used to fit a standard curve.
std	data frame of standard dilutions
fitpar	values of function parameters
FUNmod	model function
iout	indices of removed standard points.
bg	background values
smp	sample values
smpflag	character vector, flags for each sample
trimval	for final results, the values at which the samples are trimmed
trimext	integer vector of length two indicating if the values are trimmed at the extremum (lower and upper)
ptcol	color of the standard points on the plot.
rugcols	vector of three colors for the rugplot, which indicates sample values (inside the bounds, between the bounds and extrema, and beyond extrema).
...	further graphical parameters.

Details

to be added

Greenhouse-Lab/lumfit documentation built on July 20, 2020, 8 p.m.