addDemuxletResults: Add Demuxlet Results to ArchR Project
In GreenleafLab/ArchR: Analyzing single-cell regulatory chromatin in R.
addDemuxletResults R Documentation
Add Demuxlet Results to ArchR Project
Description
This function will read in the .best file output from demuxlet and add the doublet
classifications into the cellColData for the ArchR Project
Usage
addDemuxletResults(ArchRProj = NULL, bestFiles = NULL, sampleNames = NULL)
Arguments
ArchRProj
An ArchRProject object.
bestFiles
The file path to the .best files created by Demuxlet. There should be one .best file for each sample in the ArchRProject.
sampleNames
The sample names corresponding to the .best files. These must match the sample names present in the ArchRProject.
GreenleafLab/ArchR documentation built on Feb. 28, 2024, 4:17 p.m.
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| addDemuxletResults | R Documentation |
Add Demuxlet Results to ArchR Project
Description
This function will read in the .best file output from demuxlet and add the doublet classifications into the cellColData for the ArchR Project
Usage
addDemuxletResults(ArchRProj = NULL, bestFiles = NULL, sampleNames = NULL)
Arguments
ArchRProj |
An |
bestFiles |
The file path to the .best files created by Demuxlet. There should be one .best file for each sample in the |
sampleNames |
The sample names corresponding to the .best files. These must match the sample names present in the |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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