Description Usage Arguments Value See Also
get_m1_nuc
1 2 | get_m1_nuc(nucs.ranges, sites, annotate_sites = F, max_dist = 350,
shift = 0)
|
nucs.ranges |
GRanges object with nucleosome positions |
sites |
GRanges object with sites to get -1 nucs from. |
annotate_sites |
what to return– sites with -1 nuc annotation or +1 nucs? |
max_dist |
what is maximum distance to consider |
shift |
integer shift to apply to sites before finding -1 |
returns either subset of nucs that are -1 or annotated version of sites
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