spatialpoints_bold_df: Transform curated BOLD data.frame into spatialpoints object...
In Grelot/rgeogendiv: Geographic Genetic Diversity
Description
Usage
Arguments
Value
Description
Given a BOLD individual georeferenced sequences dataframe and a projection CRS,
this function will return a spatialpoints object with all coordinates of BOLD specimen.
Usage
1
2
3
4
5
spatialpoints_bold_df(
dfBold,
projectionCRS = "EPSG:4326",
fishbaseValidation = FALSE
)
Arguments
dfBold
A data.frame with specimen sequences as row and 81 descriptors as column.
Mandatory fields:
lon,
lat,
species_name,
fishbase_species_name,
genus_name,
family_name,
order_name,
class_name,
sequence
projectionCRS
Interface class to the PROJ projection and transformation system.
Default value is "+init=epsg:3347"
Value
a spatialpoints object with taxonomic information and DNA sequence
Grelot/rgeogendiv documentation built on Dec. 22, 2020, 5:51 a.m.
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Description Usage Arguments Value
Description
Given a BOLD individual georeferenced sequences dataframe and a projection CRS, this function will return a spatialpoints object with all coordinates of BOLD specimen.
Usage
1 2 3 4 5 | spatialpoints_bold_df(
dfBold,
projectionCRS = "EPSG:4326",
fishbaseValidation = FALSE
)
|
Arguments
dfBold |
A data.frame with specimen sequences as row and 81 descriptors as column. Mandatory fields: lon, lat, species_name, fishbase_species_name, genus_name, family_name, order_name, class_name, sequence |
projectionCRS |
Interface class to the PROJ projection and transformation system. Default value is "+init=epsg:3347" |
Value
a spatialpoints object with taxonomic information and DNA sequence
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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