AnnoAPAc: Annotate the APA clusters from a GTF file
In HHengUG/hatpal2: APA clusters calling and analysis
Description
Usage
Arguments
Value
Examples
Description
Annotate the APA clusters from a GTF file
Usage
1
Arguments
APAc_file
APA clusters file from MapAPAc()
gtf_file
A reference GTF file
w_strand
which strand, "+" or "-"
add_chr
whether to add character "chr" on the chr_name of the GTF (default FALSE)
Value
Null, An annotated file in the same dir.
Examples
1
AnnoAPAc("APA_map.out", "hg19.gtf", "-")
HHengUG/hatpal2 documentation built on Dec. 17, 2021, 10:26 p.m.
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Description Usage Arguments Value Examples
Description
Annotate the APA clusters from a GTF file
Usage
1 |
Arguments
APAc_file |
APA clusters file from MapAPAc() |
gtf_file |
A reference GTF file |
w_strand |
which strand, "+" or "-" |
add_chr |
whether to add character "chr" on the chr_name of the GTF (default FALSE) |
Value
Null, An annotated file in the same dir.
Examples
1 | AnnoAPAc("APA_map.out", "hg19.gtf", "-")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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