ExtractChrinfo: Extracting the chromosomes information from the indexed BAM...
In HHengUG/hatpal2: APA clusters calling and analysis
Description
Usage
Arguments
Value
Examples
Description
Extracting the chromosomes information from the indexed BAM file, including names and length.
Usage
1
ExtractChrinfo(in_bamfile)
Arguments
in_bamfile
A indexed BAM file, and the index files (.bai) must be in the same directory of the indexed BAM
Value
A data.table with chromosomes names and length
Examples
1
chr_info <- ExtractChrinfo("input/test.sorted.bam")
HHengUG/hatpal2 documentation built on Dec. 17, 2021, 10:26 p.m.
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Description Usage Arguments Value Examples
Description
Extracting the chromosomes information from the indexed BAM file, including names and length.
Usage
1 | ExtractChrinfo(in_bamfile)
|
Arguments
in_bamfile |
A indexed BAM file, and the index files (.bai) must be in the same directory of the indexed BAM |
Value
A data.table with chromosomes names and length
Examples
1 | chr_info <- ExtractChrinfo("input/test.sorted.bam")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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