HelenaLC/muscat: Multi-sample multi-group scRNA-seq data analysis tools

`muscat` provides various methods and visualization tools for DS analysis in multi-sample, multi-group, multi-(cell-)subpopulation scRNA-seq data, including cell-level mixed models and methods based on aggregated “pseudobulk” data, as well as a flexible simulation platform that mimics both single and multi-sample scRNA-seq data.

Getting started

Package details

Bioconductor views DifferentialExpression Sequencing SingleCell Software StatisticalMethod Visualization
LicenseGPL (>= 2)
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
HelenaLC/muscat documentation built on Nov. 12, 2019, 1:36 a.m.