incl/readHiC.R
In HenrikBengtsson/TopDom: An Efficient and Deterministic Method for Identifying Topological Domains in Genomes
path <- system.file("exdata", package = "TopDom", mustWork = TRUE)
## Original count data
chr <- "chr19"
pathname <- file.path(path, sprintf("nij.%s.gz", chr))
data <- readHiC(pathname, chr = chr, binSize = 40e3)
print(data)
str(data)
HenrikBengtsson/TopDom documentation built on April 9, 2023, 2:11 a.m.
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path <- system.file("exdata", package = "TopDom", mustWork = TRUE)
## Original count data
chr <- "chr19"
pathname <- file.path(path, sprintf("nij.%s.gz", chr))
data <- readHiC(pathname, chr = chr, binSize = 40e3)
print(data)
str(data)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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