Man pages for HenrikBengtsson/TopDomStudy
TopDom Study by Segal et al.
| as_TopDomData | Coerces 'hic_bin()' Data into list of TopDomData Objects |
| compile_by_organism | Compile Ramani HiC Data Files into Data Frames stored in RDS... |
| crc32 | CRC32 Checksum of an Object |
| gg_overlap_score_summary_vs_fraction | Plots TopDom Overlap Scores and Lengths as a Function of... |
| grapes-set-help-grapes | Assigns a value to a variable, unless it already exists |
| hic_bin | Bins HiC Reads in a Data Frame into Chromosome-Pair Count... |
| import_topdom_overlap_scores | Import all test-set TopDom scores into a single data.frame |
| import_topdom_regions | Import all test-set TopDom regions into a single data.frame |
| maybe | An R Expression that Maybe Evaluated Later |
| overlap_scores_partitions | Calculates TopDom Overlap Scores Across Partitions |
| overlap_score_summary | Summarizes the TopDom Best Scores across TopDomOverlapScores |
| overlap_score_summary_grid | Calculate and Summarize TopDom Overlap Scores Across... |
| overlap_score_summary_vs_bin_size | Calculate and Summarize TopDom Overlap Scores as Function of... |
| overlap_score_summary_vs_fraction | Calculate and Summarize TopDom Overlap Scores as Function of... |
| read_rds | Robustly Reads an RDS File |
| read_topdom_overlap_scores | Read TopDom Regions from TopDomStudy Files |
| read_topdom_regions | Read TopDom Regions from TopDomStudy Files |
| sample_partitions | Generate Random, Non-Overlapping Partition of Indices |
| sample_partitions_by_cells | Generate Random, Non-Overlapping Partition of Cells |
| sample_partitions_by_cells_by_half | Generate Random, Non-Overlapping Two-Set Partition of Cells... |
| sample_partitions_by_half | Generate Random, Non-Overlapping Partitions of Indices with... |
| sample_partitions_similar_weights | Generate Random, Non-Overlapping Similarly-Weighted Partition... |
| sample_partitions_similar_weights_by_half | Generate Random, Non-Overlapping, Similarly-Weighted, Two-Set... |
| save_rds | Robustly Saves an Object to RDS File Atomically |
| split_by_celltype | Split Per-Organism Compiled File Data into Subsets of Cell... |
| split_by_celltype_chromosome | Split Per-Cell Type Compiled File Data into Per Chromosome |
| stop_if_not | Asserts the Truth of R Expressions |
| topdom_partitions | Fit TopDom Across Partitions |
| TopDomStudy | TopDomStudy: TopDom Study by Segal et al. |
| Try | Tweaks a Function to be Evaluated using try() |
| unique_by | Efficiently Extract Unique Elements from a Data Frame |
