writeTpmap: Writes BPMAP and TPMAP files

In HenrikBengtsson/affxparser: Affymetrix File Parsing SDK

Writes BPMAP and TPMAP files

Description

Writes BPMAP and TPMAP files.

Usage

writeTpmap(filename, bpmaplist, verbose = 0)

tpmap2bpmap(tpmapname, bpmapname, verbose = 0)

Arguments

filename	The filename.
bpmaplist	A list structure similar to the result of readBpmap.
tpmapname	Filename of the TPMAP file.
bpmapname	Filename of the BPMAP file.
verbose	How verbose do we want to be.

Details

writeTpmap writes a text probe map file, while tpmap2bpmap converts such a file to a binary probe mapping file. Somehow Affymetrix has different names for the same structure, depending on whether the file is binary or text. I have seen many TPMAP files referred to as BPMAP files.

Value

These functions are called for their side effects (creating files).

Author(s)

Kasper Daniel Hansen

See Also

readBpmap

HenrikBengtsson/affxparser documentation built on Nov. 10, 2024, 11:33 a.m.