fitCalMaTeCNprobes.matrix: Normalizes non-polymorphic copy number loci according to the...
In HenrikBengtsson/calmate: Improved Allele-Specific Copy Number of SNP Microarrays for Downstream Segmentation
fitCalMaTeCNprobes.matrix R Documentation
Normalizes non-polymorphic copy number loci according to the CalMaTe method
Description
Normalizes non-polymorphic copy number loci according to the CalMaTe method.
Usage
## S3 method for class 'matrix'
fitCalMaTeCNprobes(dataT, references, ...)
Arguments
dataT
A JxI numeric matrix, where J is the number of loci
and I is the number of samples.
references
A integer vector with elements in [1,I] specifying
which samples should be used as the reference set.
...
Not used.
Value
Returns a numeric vector of length J.
HenrikBengtsson/calmate documentation built on March 21, 2022, 6:32 p.m.
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| fitCalMaTeCNprobes.matrix | R Documentation |
Normalizes non-polymorphic copy number loci according to the CalMaTe method
Description
Normalizes non-polymorphic copy number loci according to the CalMaTe method.
Usage
## S3 method for class 'matrix' fitCalMaTeCNprobes(dataT, references, ...)
Arguments
dataT |
A JxI |
references |
A |
... |
Not used. |
Value
Returns a numeric vector of length J.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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