parse_clustered_otu: parse_clustered_otu

In Hide-Fun/metabarcode: matabar; tools for metabarcoding

Description

parse_clustered_otu

Usage

parse_clustered_otu(.clustered_otu, .col_name = X1)

Arguments

.clustered_otu	clustered.otu.gz produced by Claident.
.col_name	name of column.

Examples

clustered_otu <- data.frame(
   otu = c(">representative_otu1", "assigned_otu1", "assigned_otu2",
          ">representative_otu2", "assigned_otu1",
          ">representative_otu3")
)
parse_clustered_otu(.clustered_otu = clustered_otu,
                    .col_name = otu)

Hide-Fun/metabarcode documentation built on March 10, 2021, 11:27 p.m.