README.md

In Hla-Lab/SeuratExplorer: An Interactive Shiny App for Visualizing scRNAseq Data Processed in Seurat

SeuratExplorer

An interactive R shiny application for exploring scRNAseq data processed in Seurat

Installation

To use SeuratExplorer, please install the required prerequisites.

# Install prerequisite packages
install.packages(c("Seurat", "ggplot2", "shiny", "shinydashboard", "tidyverse", "scales", "cowplot"))

Install SeuratExplorer from GitHub.

# Install SeuratExplorer
install.packages('remotes')
remotes::install_github(repo = "Hla-Lab/SeuratExplorer")

Running the App

To open SeuratExplorer, launch the app from the R console or Rstudio

library(SeuratExplorer)
launchSeuratExplorer()

Hla-Lab/SeuratExplorer documentation built on May 22, 2022, 10:44 a.m.