Man pages for Hla-Lab/SeuratExplorer
An Interactive Shiny App for Visualizing scRNAseq Data Processed in Seurat
| analyze_LR | Generate ligand-receptor table based on gene signatures |
| crossreference_degs | Find DE'ed ligand-receptor pairs in LR table |
| flexible_vln | VlnPlot wrapper for stacked/non-stacked plots |
| get_all_degs | Wrapper for FindMarkers() with formating for downstream LR... |
| launchSeuratExplorer | Launch SeuratExplorer |
| legit_annotations | Get legit annotations from metadata column names |
| read_genes | Parse input of comma seperated genes |
| replace_nones | Replace 'None' with NULL for meaningful selections |
| server | Server for SeuratExplorer shiny app |
| ui | UI for shiny App interface |
