est_imports_base: Estimate imports base

In HopkinsIDD/covidImportation: Estimating the Number of Imported COVID-19 Cases

Description

This is the base model for estimating importations. We will use this within the larger framework to get importations per simulation

Usage

est_imports_base(
  input_data,
  tr_inf_redux = 0,
  meanD,
  u_origin,
  allow_travel_variance = FALSE
)

Arguments

input_data	Full, combined input data that includes incident cases, travel volume, and population for all sources/destination pairs
tr_inf_redux	Default=1; Travel reduction given infected
meanD	Vector of length nrow(input_data); mean duration of time during which an infected individual can travel, in days.
u_origin	Vector of length nrow(input_data); underreporting rate in the infection source location.
allow_travel_variance	Logical, whether to sample the travel

HopkinsIDD/covidImportation documentation built on Sept. 14, 2020, 2:43 p.m.