get_incidence_fits: Get incidence data from JHUCSSE

In HopkinsIDD/covidImportation: Estimating the Number of Imported COVID-19 Cases

Description

Get incidence data from JHUCSSE

Usage

get_incidence_fits(
  aggr_level = "UID",
  first_date = ISOdate(2019, 12, 1),
  last_date = Sys.time(),
  case_data_dir = "data/case_data",
  save_raw_data = TRUE,
  us_data_only = FALSE
)

Arguments

aggr_level	"UID", "source", level at which to calculate the cumulative and incident cases. with UID, unassigned locations are dropped; "source" refers to US state, Chinese province, and national otherwise.
case_data_dir	directory where case data is being saved
save_raw_data	whether to save raw data locally
us_data_only	whether to only pull US data
check_saved_data	whether to check locally saved github data

HopkinsIDD/covidImportation documentation built on Sept. 14, 2020, 2:43 p.m.