API for HowardChao/RNA-seq_pipeline
| Global functions | |
|---|---|
| .onAttach | Source code |
| BallgownPreprocess | Man page Source code |
| CheckBallgownObject | Man page Source code |
| CheckDirAll | Man page Source code |
| CheckGffcompare | Man page Source code |
| CheckHisat2 | Man page Source code |
| CheckInputDirFiles | Man page Source code |
| CheckPrefixPath | Man page Source code Source code |
| CheckSamtools | Man page Source code |
| CheckStringTie | Man page Source code |
| CheckToolAll | Man page Source code |
| CopyInputDir | Man page Source code |
| CreateHisat2Index | Man page |
| DEDESeq2Plot | Man page Source code |
| DEGCorrelationPlot | Man page Source code |
| DEGFPKMBoxPlot | Source code |
| DEGFrequencyPlot | Man page Source code |
| DEGMAPlot | Man page Source code |
| DEGPCAPlot | Man page Source code |
| DEGPlotAll | Source code |
| DEGTranscriptRelatedPlot | Man page Source code |
| DEGVolcanoPlot | Man page Source code |
| DEGedgeRPlot | Man page Source code |
| DESelection | Source code |
| ExportPath | Man page Source code |
| GffcompareRefSample | Man page Source code |
| Hisat2AlignmentDefault | Man page Source code |
| Hisat2ReportAssemble | Man page Source code |
| InstallAll | Man page Source code |
| InstallGffcompareBinary | Man page Source code |
| InstallHisat2Bianry | Man page Source code |
| InstallSamtoolsBinary | Man page Source code |
| InstallStringTieBinary | Man page Source code |
| InstallToolsCMD | Man page Source code |
| LoadBallgownObject | Man page Source code |
| MkdirAll | Man page Source code |
| MkdirGeneDir | Man page Source code |
| MkdirRNAseq_bin | Man page Source code |
| MkdirRNAseq_results | Man page Source code |
| PreDECountTable | Man page Source code |
| ProgressGenesFiles | Man page Source code |
| QualityControl | Man page Source code |
| RNASeq | Man page |
| RNASeqWorkFlowParam-class | Man page |
| RNAseqPipeline | Man page Source code |
| RNAseqPipelineCMD | Man page Source code |
| SamtoolsToBam | Man page Source code |
| StringTieAssemble | Man page Source code |
| StringTieMergeTrans | Man page Source code |
| StringTieToBallgown | Man page Source code |
| check_RNASeqWorkFlowParam | Source code |
| get_os | Man page Source code |
