R/RNASeqRParam_Sam_show_method.R

In HowardChao/RNASeqR: RNASeqR: an R package for automated two-group RNA-Seq analysis workflow

# the show method:
setMethod('show', 'RNASeqRParam_Sam', function(object){
  cat("RNASeqRParam_Sam S4 object\n",
      "             os.type :", object@os.type, "\n",
      "     python.variable : (Availability:",
      object@python.variable$check.answer,
      ", Version:", object@python.variable$python.version,")\n",
      "         python.2to3 :", object@python.2to3, "\n",
      "         path.prefix :", object@path.prefix, "\n",
      "   input.path.prefix :", object@input.path.prefix, "\n",
      "         genome.name :", object@genome.name, "\n",
      "      sample.pattern :", object@sample.pattern,"\n",
      "independent.variable :", object@independent.variable,"\n",
      "          case.group :", object@case.group,"\n",
      "       control.group :", object@control.group,"\n"
  )
})