Man pages for HuntsmanCancerInstitute/hciRdata
Datasets for hciR

fly90Fruitfly gene annotations from Ensembl release 90
fly92Fruitfly gene annotations from Ensembl release 92
format_msigFormat MsigDB names
hugoHuman gene synonyms from HUGO
human90Human gene annotations from Ensembl release 90
human92Human gene annotations from Ensembl release 92
mgiMouse and human homologs from MGI
mouse90Mouse gene annotations from Ensembl release 90
mouse92Mouse gene annotations from Ensembl release 92
mouse92_homologsMouse and human homologs from Ensembl release 92
msig_cancerC4 cancer sets in the MSigDB.
msig_goC5 Gene Ontology sets in the MSigDB.
msig_hallmarkHallmark gene sets in MSigDB.
msig_immunologicC7 immunologic signatures in the MSigDB.
msig_motifsC3 motifs in the MSigDB.
msig_oncogenicC6 oncogenic signatures in the MSigDB.
msig_pathwaysC2 pathways in the MSigDB.
pig90Pig gene annotations from Ensembl release 90
pig92Pig gene annotations from Ensembl release 92
rabbit90Rabbit gene annotations from Ensembl release 90
rabbit92Rabbit gene annotations from Ensembl release 92
rat90Rat gene annotations from Ensembl release 90
rat92Rat gene annotations from Ensembl release 92
read_biomart_versionRead biomart annotations
read_msigdbRead MSigDB GMT file into a nested list of databases and...
sheep90Sheep gene annotations from Ensembl release 90
sheep92Sheep gene annotations from Ensembl release 92
worm90Roundworm (C. elegans) gene annotations from Ensembl release...
worm92Roundworm (C. elegans) gene annotations from Ensembl release...
yeast90Yeast (S. cerevisiae) gene annotations from Ensembl release...
yeast92Yeast (S. cerevisiae) gene annotations from Ensembl release...
zebrafish90Zebrafish gene annotations from Ensembl release 90
zebrafish92Zebrafish gene annotations from Ensembl release 92
HuntsmanCancerInstitute/hciRdata documentation built on Oct. 26, 2018, 2:40 a.m.