mouse104: Mouse gene annotations from Ensembl release 104

In HuntsmanCancerInstitute/hciRdata: Datasets for hciR

Mouse gene annotations from Ensembl release 104

Description

Mouse gene annotations from Ensembl release 104

Usage

mouse104

Format

A tibble with 10 columns: id, gene_name, biotype, chromosome, start, end, strand, description, transcripts, human_homolog from MGI 6.14.

Source

read_biomart("mouse", version = 104). the mouse.R file in the data-raw directory for details.

Examples

mouse104
filter(mouse104[, c(1:4,10)], grepl(",", human_homolog))
group_by(mouse104, biotype) %>%
 summarize(n=n(), human_homologs = sum(!is.na(human_homolog))) %>%
  arrange(desc(n))

HuntsmanCancerInstitute/hciRdata documentation built on Aug. 22, 2023, 2:18 a.m.