mouse112: Mouse gene annotations from Ensembl release 112

In HuntsmanCancerInstitute/hciRdata: Datasets for hciR

Mouse gene annotations from Ensembl release 112

Description

Mouse gene annotations from Ensembl release 112

Usage

mouse112

Format

A tibble with 10 columns: id, gene_name, biotype, chromosome, start, end, strand, description, transcripts, human_homolog from MGI 6.14.

Source

read_biomart("mouse", version = 112). the mouse.R file in the data-raw directory for details.

Examples

mouse112
filter(mouse112[, c(1:4,10)], grepl(",", human_homolog))
group_by(mouse112, biotype) %>%
 summarize(n=n(), human_homologs = sum(!is.na(human_homolog))) %>%
  arrange(desc(n))

HuntsmanCancerInstitute/hciRdata documentation built on June 28, 2024, 8:46 p.m.