DistanceMatrix: Computes a distance matrix
In IGNEX/IgnexCompare:
Description
Arguments
Value
Author(s)
Description
Generates a matrix of manhattan or hellinguer distances between the rows of two pollen sequences.
Arguments
sequences
A list produced by the function PrepareInputSequences.
method
Either "manhattan" computed as sum(abs(x - y)), "hellinger" computed as sqrt(1/2 * sum(sqrt(x)-sqrt(y))^2), or "euclidean", computed as sqrt(sum((x - y)^2)).
Value
A matrix with manhattan or hellinger distances among cases of the sequences contained in the list sequences. The sequence sequence.A will define the rows, and sequence.B will define the columns.
Author(s)
Blas Benito <blasbenito@gmail.com>
IGNEX/IgnexCompare documentation built on May 8, 2019, 10:53 a.m.
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Description Arguments Value Author(s)
Description
Generates a matrix of manhattan or hellinguer distances between the rows of two pollen sequences.
Arguments
sequences |
A list produced by the function PrepareInputSequences. |
method |
Either "manhattan" computed as sum(abs(x - y)), "hellinger" computed as sqrt(1/2 * sum(sqrt(x)-sqrt(y))^2), or "euclidean", computed as sqrt(sum((x - y)^2)). |
Value
A matrix with manhattan or hellinger distances among cases of the sequences contained in the list sequences. The sequence sequence.A will define the rows, and sequence.B will define the columns.
Author(s)
Blas Benito <blasbenito@gmail.com>
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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