get_expert_distribution_shp_CAAB: match species CAAB code with CSIRO expert distribution...

In IMOS-AnimalTracking/remora: Rapid Extraction of Marine Observations for Roving Animals

match species CAAB code with CSIRO expert distribution shapefiles

Description

Get expert distribution shapefile, if available, from CSIRO's Geoserver. Full CAAB code list: http://www.marine.csiro.au/datacentre/caab/caab_dump_latest.xlsx

Usage

get_expert_distribution_shp_CAAB(CAAB_species_id, spe)

Arguments

CAAB_species_id	CAAB id of species for which a distribution shapefile is required
spe	species scientific name

Details

For a few species acoustically tagged no shapefile exists.

Value

shp is a multipolygon sf data.frame object of the species' distribution

Examples

# example code
x <- TownsvilleReefQC$QC[[1]]
expert_shp <- get_expert_distribution_shp_CAAB(CAAB_species_id = x$CAAB_species_id[1], 
spe = x$species_scientific_name[1])

IMOS-AnimalTracking/remora documentation built on Jan. 29, 2025, 4:38 p.m.