get_anomaly: Get the anomalies from a model

In INBO-Natura2000/n2kanalysis: Generic Functions to Analyse Data from the 'Natura 2000' Monitoring

Get the anomalies from a model

Description

Get the anomalies from a model

Usage

get_anomaly(analysis, ...)

## S4 method for signature 'n2kInla'
get_anomaly(
  analysis,
  n = 20,
  expected_ratio = 5,
  expected_absent = 5,
  random_threshold = 1.05,
  verbose = TRUE,
  ...
)

## S4 method for signature 'n2kModel'
get_anomaly(analysis, verbose = TRUE, ...)

Arguments

analysis	The model to add
...	Extra options. See details.
n	the number of anomalies per category.
expected_ratio	Observations that have observed / fitted > expected_ratio or fitted / observed > expected_ratio are potential anomalies. Defaults to 5, which implies that observed values that are 5 times higher or lower than the fitted values are potential anomalies.
expected_absent	Zero observations where fitted > expected_absent are potential anomalies.
random_threshold	The minimal relative effect size of a random effect. Random effect with a smaller effect size will never be an anomaly. Defaults to 1.05 (5%).
verbose	Print extra information on the screen

INBO-Natura2000/n2kanalysis documentation built on Feb. 15, 2024, 11:24 a.m.