writeDataForGs3: Write data

In INRA/rgs3: R package wrapping the GS3 program for genomic selection

Description

Write the data file for GS3.

Usage

writeDataForGs3(x, file, inds, col.id = 1, col.traits = 2,
  binary.traits = FALSE)

Arguments

x	data frame containing individual identifiers (names of parameter "inds"), trait values (possibly several traits), covariables and cross-classified factors. Missing data coded as "NA" will be replaced by "0" if it is in a 'trait' column and the trait is binary, and by "-9999" otherwise.
file	path to the text file to which x will be written
inds	named vector with values from 1 to I and names the corresponding individual identifiers; this very same vector should also be used with writeGenosForGs3
col.id	column index of the individual identifiers in x
col.traits	column indices of traits in x
binary.traits	logical vector indicating if traits are binary or not (should be of the same length as col.traits)

Value

nothing

Author(s)

Timothee Flutre

See Also

writeGenosForGs3, writeConfigForGs3

INRA/rgs3 documentation built on May 20, 2019, 5:24 p.m.