Description Usage Arguments Value Examples
Load multiple hap.py results into a happy_samplesheet
object starting from a samplesheet csv.
1 | read_samplesheet(samplesheet_path, lazy = TRUE)
|
samplesheet_path |
Path to samplesheet.csv. Required fields: |
lazy |
Do not load larger hap.py results until needed. Default: |
A happy_samplesheet
object, with the following fields:
samplesheet
: the original samplesheet, stored as a data.frame
.
results
: a happy_result_list
that contains individual happy_result
objects.
1 2 3 4 5 6 7 8 9 10 11 | ## Not run:
## example happyr_samplesheet.csv
# group_id,replicate_id,happy_prefix
# PCR-Free,NA12878-I30,NA12878-I30_S1
# PCR-Free,NA12878-I33,NA12878-I33_S1
# Nano,NA12878-R1,NA12878-R1_S1
# Nano,NA12878-R2,NA12878-R2_S1
hap_samplesheet <- read_samplesheet(samplesheet_path = 'happyr_samplesheet.csv')
## End(Not run)
|
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