The posterior distributions of the parameters from the multi-state model go in this directory.
The file ../params_mstate_nma.R
uses this data to create the params_mstate_nma
object that loads with the package.
The following notation is used to denote model type:
fp-p0
(1st order fractional polynomial model with p1 = 0 (i.e., a Weibull model))fp-p00
(2nd order fractional polynomial model with p1 = p2 = 0)fp-p1
(1st order fractional polynomial model with p1 = 1 (i.e., a Gompertz model))fp-p01
(2nd order fractional polynomial model with p1 = 0 and p2 = 1)The directory contains two types of files: (1) the parameter estimates and (2) lookup files.
The directory must contain files for the meta-analyses (models for absolute effects) and network meta-analyses (models for relative treatment effects).
First line fixed effects meta-analyses for gefitnib:
ma-1L-fe-gef-fp-p0.csv
ma-1L-fe-gef-fp-p00.csv
ma-1L-fe-gef-fp-p1.csv
ma-1L-fe-gef-fp-p01.csv
Second line fixed effects meta-analyses for platinum-based doublet chemotherapy (PBDC):
ma-2L-fe-pbdc-fp-p0.csv
ma-2L-fe-pbdc-fp-p00.csv
ma-2L-fe-pbdc-fp-p1.csv
ma-2L-fe-pbdc-fp-p01.csv
Second line fixed effects meta-analysis for osimertinib among patients with a T790M mutation:
ma-2L-fe-t790m-osi-fp-p0.csv
ma-2L-fe-t790m-osi-fp-p00.csv
ma-2L-fe-t790m-osi-fp-p1.csv
ma-2L-fe-t790m-osi-fp-p01.csv
First line fixed effects network meta-analyses of treatments relative to gefitnib:
nma-1L-fe-fp-p0.csv
nma-1L-fe-fp-p00.csv
nma-1L-fe-fp-p1.csv
nma-1L-fe-fp-p01.csv
There are two types of lookup files.
The first type links treatments in the model to the numeric identifiers in the NMA:
tx-lookup-1L.csv
tx-lookup-2L.csv
The second type summarizes the parameters of the NMA in terms of the parametric and flexible
parametric multi-state survival models from the hesim
package (which is used to simulate
the economic model):
params-lookup-1L.xlsx
params-lookup-2L-pbdc.xlsx
params-lookup-2L-t790m-osi.xlsx
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