Description Usage Arguments Value Examples
Sample a patient population for use in the individual patient simulation (sim_iviRA).
1 2 3 4 5 6 7 | sample_pop(n = 1, type = c("homog", "heterog"), age_mean = 55,
age_sd = 13, male_prop = 0.21, haq0_mean = 1.5, haq0_sd = 0.7,
wtmale = 89, wtfemale = 75, prev_dmards_mean = 3.28,
prev_dmards_sd = 1.72, das28_mean = 6, das28_sd = 1.2,
sdai_mean = 43, sdai_sd = 13, cdai_mean = 41, cdai_sd = 13,
cor_das28_sdai = 0.86, cor_das28_cdai = 0.86, cor_das28_haq = 0.38,
cor_sdai_cdai = 0.94, cor_sdai_haq = 0.34, cor_cdai_haq = 0.34)
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n |
Number of samples. |
type |
Should male and female patients be heterogeneous or homogeneous. Default is homogeneous. |
age_mean |
Mean age. |
age_sd |
Standard deviation of age. |
male_prop |
Proportion male. |
haq0_mean |
Mean baseline HAQ (i.e., HAQ at the start of the model) score. |
haq0_sd |
Standard deviation of baseline HAQ score. |
wtmale |
Male weight. |
wtfemale |
Female weight. |
prev_dmards_mean |
Mean number of previous DMARDs. |
prev_dmards_sd |
Standard deviation of number of previous DMARDs. |
das28_mean |
Mean of DAS28. |
das28_sd |
Standard deviation of DAS28. |
sdai_mean |
Mean of SDAI. |
sdai_sd |
Standard deviation of SDAI. |
cdai_mean |
Mean of CDAI. |
cdai_sd |
Standard deviation of CDAI. |
cor_das28_sdai |
Correlation between DAS28 and SDAI. |
cor_das28_cdai |
Correlation between DAS28 and CDAI. |
cor_das28_haq |
Correlation between DAS28 and baseline HAQ. |
cor_sdai_cdai |
Correlation between SDAI and CDAI. |
cor_sdai_haq |
Correlation between SDAI and HAQ. |
cor_cdai_haq |
Correlation between CDAI and HAQ. |
Matrix of patient characteristics. One row for each patient and one column for each variable. Current variables are:
Age in years.
1 = male, 0 = female.
Patient weight in KG.
Number of previous DMARDs.
DAS28 score.
SDAI score.
CDAI score.
Baseline HAQ score.
1 | sample_pop(n = 10, type = "heterog", age_mean = 50)
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