plot_diet_species: Plot diet

Description Usage Arguments Value Examples

Description

Plot the diet composition of asked species

Usage

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plot_diet_species(myfit, mydata, spec_names)

Arguments

myfit

a fit as returned by fit_escroc

mydata

a list as returned by prepare_data

spec_names

a character or vector list containing the species names to be plotted

Value

a list of the same length as spec_names with a ggplot

Examples

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#importing data
data(signature_data)
data(prior_diet_matrix)
data(LOQ)
data(prior_signature_data)
prior_delta <- data.frame(tracer=c("X15N","X13C"),mean=c(3,0),sd=c(1,1))

#check that everything is ok
mydata <- prepare_data(prior_diet_matrix,signature_data,
LOQ,prior_signature_data,prior_delta)

#build the model
mymodel <- building_model(mydata)

#fit the model
myresults <- fit_escroc(mydata, mymodel)

#plot diet
print(plot_diet_species(myresults,mydata,"Sole"))

Irstea/escroc documentation built on May 17, 2019, 7:43 a.m.