initLambdaiPALM2: initLambdaiPALM2
In Ivis4ml/SparseSEMs: Sparse Structural Equation Models for jointly inferring Gene Regulatory Networks
Description
Usage
Arguments
Value
Description
initLambdaiPALM2
Usage
1
initLambdaiPALM2(Xs, Ys, Bs, Fs, Sk, sigma2, Wl, Wf, p, k)
Arguments
Xs
eQTL matrices
Ys
Gene expression matrices
Bs
initialized GRN-matrices
Fs
initialized eQTL effect matrices
Sk
eQTL index of genes
sigma2
initialized noise variance
Wl
weight matrices for adaptive lasso terms
Wf
weight matrix for adaptive fused lasso term
p
number of genes
k
number of eQTL
Value
lambda_max
Ivis4ml/SparseSEMs documentation built on May 23, 2019, 2:43 p.m.
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Description Usage Arguments Value
Description
initLambdaiPALM2
Usage
1 | initLambdaiPALM2(Xs, Ys, Bs, Fs, Sk, sigma2, Wl, Wf, p, k)
|
Arguments
Xs |
eQTL matrices |
Ys |
Gene expression matrices |
Bs |
initialized GRN-matrices |
Fs |
initialized eQTL effect matrices |
Sk |
eQTL index of genes |
sigma2 |
initialized noise variance |
Wl |
weight matrices for adaptive lasso terms |
Wf |
weight matrix for adaptive fused lasso term |
p |
number of genes |
k |
number of eQTL |
Value
lambda_max
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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