In JGWojtyniak/ospsreports: ospsreports Bookdown Workflow

Preface {#chappreface}

knitr::opts_chunk$set(cache=F,echo = F,message = F,warning = F)

# automatically create a bib database for R packages
knitr::write_bib(c(
  .packages(), 
  'bookdown',
  'huxtable', 
  'cowplot', 
  'knitr', 
  'kableExtra', 
  'tidyverse', 
  'readxl', 
  'ggforce', 
  'pipeR', 
  'janitor', 
  'DiagrammeR', 
  'DiagrammeRsvg', 
  'rsvg', 
  #'extrafont', 
  'ggrepel', 
  'units', 
  'openxlsx', 
  'fuzzyjoin', 
  'scales', 
  'colorblindr', 
  'PKNCA', 
  'arsenal', 
  'flextable', 
  'ggalt', 
  'rmarkdown',
  "R"
), 'bibfiles/packages.bib')

The aim of this supplementary material is to present a complete but also easily comprehensible description of the models and model networks introduced in the publication "PBPK modelling of a pretty cool compound". The document attempts to display the current state of the art for reporting \acrfull{pbpk}\index{PBPK} models.

For the development of this document a wide range of different software packages were used. Figure \@ref(fig:figrenderingflow) should give a brief description of the rendering workflow and the tools required. For a comprehensive list of tools and packages see Table \@ref(tab:tabreqsoftware).

knitr::include_graphics("figures_external/reqpackages_workflow.png")

loadd(required_software_table)
required_software_table

JGWojtyniak/ospsreports documentation built on Nov. 14, 2019, 12:11 p.m.