llh: epiModel$llh

In JMacDonaldPhD/REpi: Pseudo-Marginal Analysis of partially observed Epidemics

epiModel$llh

Description

An output from an epidemic model generator, used to calculate the log-likelihood of an epidemic trajectory, given the epidemic model defined. This help page serves only to give the general behaviour of such a function, and to show the typical inputs/outputs. As such, behaviour may vary depending on the epidemic model generator used.

Arguments

X	Epidemic trajectory. Structure and shape of the state object will depend on the epidemic model generated (a trivial difference occurs when look at individual level model vs. population level models)
theta	The epidemic parameters. Structure and shape of this object will depend on the epidemic model generated

Value

Typically, this function will return a single value, the log-likelihood of the epidemic trajectory, given the defined epidemic model and a set of epidemic parameter.

JMacDonaldPhD/REpi documentation built on Aug. 2, 2022, 2:09 p.m.