JPSieg/R2easyR: Facilitates Mapping Experimental RNA Reactivity Data to Secondary Structures Drawn with R2R

A package that facilitates displaying RNA reactivity data on a RNA secondary structures when used with R2R drawing software. Includes (1) functions to read common RNA lab data formats into R (.ct and .react files), (2) A function that generates a currated list of palettes that look good on a RNA secondary structure, (3) a function that assigns colors based on experimental reactivity data, and (4) a function that writes a Stockholm file that goes directly into R2R to generate a secondary structure.

Getting started

Package details

Maintainer
LicenseNone
Version1.0
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("remotes")
remotes::install_github("JPSieg/R2easyR")
JPSieg/R2easyR documentation built on Aug. 10, 2024, 6:12 p.m.