read.stock: Read a Stockholm file
In JPSieg/R2easyR: Facilitates Mapping Experimental RNA Reactivity Data to Secondary Structures Drawn with R2R
View source: R/read.stockholm.R
read.stock R Documentation
Read a Stockholm file
Description
This function reads a Stockholm formated allignment from the RFAM database into a R
data.frame. It trims the long header at the front of the Stockholm file and keeps the
data. It also separates the Accension number and the sequence location into
separate column in the data frame. Data in data.frames are stored as strings.
Usage
read.stock(data_file)
Arguments
data_file
Path to the data file
Value
A data frame containing the information in the Stockholm file
JPSieg/R2easyR documentation built on Aug. 10, 2024, 6:12 p.m.
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View source: R/read.stockholm.R
| read.stock | R Documentation |
Read a Stockholm file
Description
This function reads a Stockholm formated allignment from the RFAM database into a R data.frame. It trims the long header at the front of the Stockholm file and keeps the data. It also separates the Accension number and the sequence location into separate column in the data frame. Data in data.frames are stored as strings.
Usage
read.stock(data_file)
Arguments
data_file |
Path to the data file |
Value
A data frame containing the information in the Stockholm file
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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