View source: R/R2ReasyR_functions.R
r2easyR.write | R Documentation |
Generates a Stockholm file and a R2R meta file that can be read by R2R to draw a secondary structure.
r2easyR.write(output, data_frame, RNA_name = "default", colors = "NA")
output |
Path to the output Stockholm file |
data_frame |
A data_frame containing columns labeled "Nucleotide", "Dotbracket", "Labels", and "Colors". |
RNA_name |
The name of the RNA that you are drawing |
colors |
How R2R will draw reactivity colors. No colors = "NA". Colored letters = "letters". Colored circles = "circles". |
A Stockholm formated file.
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