hcut: Cutter

Description Usage Arguments Value

Description

Cuts a Hscore dendrogram according to the threshold delta finding biclusters whose hscore is lesser than delta.

Usage

1
hcut(new_height, mergelist, delta, mat)

Arguments

new_height

a vector with the hscore-based height (modified or not) of the dendogram built from delta

mergelist

a list of all the possible biclusters one can get from hc

delta

a scalar value indicating the delta-threshold

mat

a matrix

Value

A list containing all the candidate biclusters whose Hscore is lesser than delta. Every single element of the list is a candidate bicluster and the elements belonging to it are reprented using the row index/label of the matrix mat.


JacopoDior/funBI documentation built on May 6, 2019, 12:01 a.m.