NEWS.md

In JayAchar/tbgeneratr: tbgenratr: tools for generating new TB variables

tbgeneratr 0.1.2.3

10 October 2019

Minor update

• New function added: reassign_lab_no() for use with Epiinfo data checks whether a diagnostic specimen number is defined in admission data and assigns the relevent patient ID that this specimen in the lab data set if it is missing.

tbgeneratr 0.1.2.2

22 August 2019

Bug fix

• records where end treatment date are missing are now included in drug_timer() calculations using the most recent date in the admission and drug changes data sets as a database time.

tbgeneratr 0.1.2.0

17 August 2019

Major update

• added function - recalculate_outcome() to recalculate treatment outcome for DR-TB in EpiInfo data
• added function - regimen_calculator() to calculate regimen at any specific timepoint

Bug fix

• prevent baseliner() generating >1 result per patient by adjusting filtering of duplicate sample results

tbgeneratr 0.1.1.6

7 August 2019

Minor update

• args in adm_generator() changed
• finalise_outcome() added to adm_generator()

Bug fix

• Bug fixes in drug_timer()
• Unit tests added for drug_timer()

tbgeneratr 0.1.1.5

26 Jun 2019

Minor update

• change in data base time calculation in drug_timer() to use most recent start treatment date or most recent drug change date in supplied data sets
• additional messages and warnings if negative days of drug exposure generated by drug_timer()
• convert base_dst variable in dst_baseliner() output into ordered factor
• bin_outcome arg added to outcome_fixer() to generate new binary factor variable of simplified treatment outcomes

tbgeneratr 0.1.1.4

11 Apr 2019

Minor update

• Vignette added: Generate admission variables guides the user through the process of generating new variables within the admission data set.

Bug fix

• fix class detection

tbgeneratr 0.1.1.2

26 Feb 2019

Minor update

• age_generator(): add categorise argument to generate additional factor variable for age.
• age_generator(): add paediatric argument to generate additional paediatric age variable.
• args fixed in age_generator.default()
• update adm_generator() to pass age_generator() args using ...

tbgeneratr 0.1.1.1

12 Feb 2019

Bug fix

• baseliner.koch6(): fixed bug of object class being erased by function.

tbgeneratr 0.1.1.0

04 Feb 2019

Major changes

• New function added: drug_timer() added for Koch6 and EpiInfo data sets. This function is designed to calculate the number of days a patient has been prescribed a specified drug in their treatment regimen. It requires admission and change data sets both cleaned using the tbcleanr package.

tbgeneratr 0.1.0.0

17 Jan 2019

Major changes

• release 0.1.0.0 which has functionality for Koch6 and EpiInfo but not Koch6 laboratory data

tbgeneratr 0.0.0.21.9003

17 Jan 2019

Major changes

• aggregate_dst() added to simplify dst_baseliner().
• dst_baseliner.epiinfo() added to package.
• dst_baseliner.koch6() added to package - option for Gr and EpiInfo lab data.

Minor changes

• drug_baseliner() args changed.
• drug_baseliner() naming output bug fixed.

tbgeneratr 0.0.0.21.9002

12 Jan 2019

Minor changes

• Added a NEWS.md file to track changes to the package.

JayAchar/tbgeneratr documentation built on Oct. 13, 2019, 1:47 a.m.