k_nt_functions.mc: Network k and g functions for spatio-temporal data...

View source: R/k_functions_nettime_sf.R

k_nt_functions.mcR Documentation

Network k and g functions for spatio-temporal data (multicore, experimental, NOT READY FOR USE)

Description

Calculate the k and g functions for a set of points on a network and in time (multicore, experimental, NOT READY FOR USE).

Usage

k_nt_functions.mc(
  lines,
  points,
  points_time,
  start_net,
  end_net,
  step_net,
  width_net,
  start_time,
  end_time,
  step_time,
  width_time,
  nsim,
  conf_int = 0.05,
  digits = 2,
  tol = 0.1,
  resolution = NULL,
  agg = NULL,
  verbose = TRUE
)

Arguments

lines

A feature collection of linestrings representing the underlying network. The geometries must be simple Linestrings (may crash if some geometries are invalid) without MultiLineSring

points

A feature collection of points representing the points on the network. These points will be snapped on their nearest line

points_time

A numeric vector indicating when the point occured

start_net

A double, the lowest network distance used to evaluate the k and g functions

end_net

A double, the highest network distance used to evaluate the k and g functions

step_net

A double, the step between two evaluations of the k and g for the network distance function. start_net, end_net and step_net are used to create a vector of distances with the function seq

width_net

The width (network distance) of each donut for the g-function. Half of the width is applied on both sides of the considered distance

start_time

A double, the lowest time distance used to evaluate the k and g functions

end_time

A double, the highest time distance used to evaluate the k and g functions

step_time

A double, the step between two evaluations of the k and g for the time distance function. start_time, end_time and step_time are used to create a vector of distances with the function seq

width_time

The width (time distance) of each donut for the g-function. Half of the width is applied on both sides of the considered distance

nsim

An integer indicating the number of Monte Carlo simulations to perform for inference

conf_int

A double indicating the width confidence interval (default = 0.05) calculated on the Monte Carlo simulations

digits

An integer indicating the number of digits to retain from the spatial coordinates

tol

When adding the points to the network, specify the minimum distance between these points and the lines' extremities. When points are closer, they are added at the extremity of the lines

resolution

When simulating random points on the network, selecting a resolution will reduce greatly the calculation time. When resolution is null the random points can occur everywhere on the graph. If a value is specified, the edges are split according to this value and the random points can only be vertices on the new network

agg

A double indicating if the events must be aggregated within a distance. If NULL, the events are aggregated only by rounding the coordinates

verbose

A Boolean indicating if progress messages should be displayed

Details

The k-function is a method to characterize the dispersion of a set of points. For each point, the numbers of other points in subsequent radii are calculated. This empirical k-function can be more or less clustered than a k-function obtained if the points were randomly located in space. In a network, the network distance is used instead of the Euclidean distance. This function uses Monte Carlo simulations to assess if the points are clustered or dispersed, and gives the results as a line plot. If the line of the observed k-function is higher than the shaded area representing the values of the simulations, then the points are more clustered than what we can expect from randomness and vice-versa. The function also calculates the g-function, a modified version of the k-function using rings instead of disks. The width of the ring must be chosen. The main interest is to avoid the cumulative effect of the classical k-function. This function is maturing, it works as expected (unit tests) but will probably be modified in the future releases (gain speed, advanced features, etc.).

Value

A list with the following values :

  • obs_k: A matrix with the observed k-values

  • lower_k: A matrix with the lower bounds of the simulated k-values

  • upper_k: A matrix with the upper bounds of the simulated k-values

  • obs_g: A matrix with the observed g-values

  • lower_g: A matrix with the lower bounds of the simulated g-values

  • upper_g: A matrix with the upper bounds of the simulated g-values

  • distances_net: A vector with the used network distances

  • distances_time: A vector with the used time distances


JeremyGelb/spNetwork documentation built on May 24, 2024, 7:23 p.m.