inst/scripts/gen.summary.tcga.raw.R
In Jfortin1/shinyMethylData: Example datasets of input data for shinyMethyl
library(shinyMethyl)
extdir <- "/dcs01/hansen/hansen_lab1/shinyMethylDatasets"
load(file.path(extdir,"RGSetHNSC.Rda"))
load(file.path(extdir,"cov.tcga.Rda"))
RGSet <- updateObject(RGSet)
summary.tcga.raw <- shinySummarize(RGSet)
summary.tcga.raw@phenotype <- cov.tcga
save(summary.tcga.raw, file = "../../data/summary.tcga.raw.rda")
Jfortin1/shinyMethylData documentation built on May 7, 2019, 10:36 a.m.
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library(shinyMethyl)
extdir <- "/dcs01/hansen/hansen_lab1/shinyMethylDatasets"
load(file.path(extdir,"RGSetHNSC.Rda"))
load(file.path(extdir,"cov.tcga.Rda"))
RGSet <- updateObject(RGSet)
summary.tcga.raw <- shinySummarize(RGSet)
summary.tcga.raw@phenotype <- cov.tcga
save(summary.tcga.raw, file = "../../data/summary.tcga.raw.rda")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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