Files in Jiaxin-Fan/ASEP
ASEP: Gene-based detection of allele-specific expression in a population by RNA seqencing
.Rbuildignore
.gitignore
ASEP.Rproj
DESCRIPTION
Figure.png
NAMESPACE
R/ASEP functions.R
README.md
_pkgdown.yml
docs/404.html
docs/articles/data_onecondition.png
docs/articles/data_twocondition.png
docs/articles/index.html
docs/articles/introduction.html
docs/articles/introduction_files/crosstalk-1.0.0/css/crosstalk.css
docs/articles/introduction_files/crosstalk-1.0.0/js/crosstalk.js
docs/articles/introduction_files/crosstalk-1.0.0/js/crosstalk.js.map
docs/articles/introduction_files/crosstalk-1.0.0/js/crosstalk.min.js
docs/articles/introduction_files/crosstalk-1.0.0/js/crosstalk.min.js.map
docs/articles/introduction_files/crosstalk-1.1.0.1/css/crosstalk.css
docs/articles/introduction_files/crosstalk-1.1.0.1/js/crosstalk.js
docs/articles/introduction_files/crosstalk-1.1.0.1/js/crosstalk.js.map
docs/articles/introduction_files/crosstalk-1.1.0.1/js/crosstalk.min.js
docs/articles/introduction_files/crosstalk-1.1.0.1/js/crosstalk.min.js.map
docs/articles/introduction_files/datatables-binding-0.11/datatables.js
docs/articles/introduction_files/datatables-binding-0.13/datatables.js
docs/articles/introduction_files/datatables-binding-0.9/datatables.js
docs/articles/introduction_files/datatables-css-0.0.0/datatables-crosstalk.css
docs/articles/introduction_files/dt-core-1.10.19/css/jquery.dataTables.extra.css
docs/articles/introduction_files/dt-core-1.10.19/css/jquery.dataTables.min.css
docs/articles/introduction_files/dt-core-1.10.19/js/jquery.dataTables.min.js
docs/articles/introduction_files/dt-core-1.10.20/css/jquery.dataTables.extra.css
docs/articles/introduction_files/dt-core-1.10.20/css/jquery.dataTables.min.css
docs/articles/introduction_files/dt-core-1.10.20/js/jquery.dataTables.min.js
docs/articles/introduction_files/figure-html/plot-1.png
docs/articles/introduction_files/figure-html/plot0-1.png
docs/articles/introduction_files/header-attrs-2.1/header-attrs.js
docs/articles/introduction_files/header-attrs-2.6/header-attrs.js
docs/articles/introduction_files/htmlwidgets-1.3/htmlwidgets.js
docs/articles/introduction_files/htmlwidgets-1.5.1/htmlwidgets.js
docs/articles/introduction_files/jquery-1.12.4/LICENSE.txt
docs/articles/introduction_files/jquery-1.12.4/jquery.min.js
docs/authors.html
docs/bootstrap-toc.css
docs/bootstrap-toc.js
docs/docsearch.css
docs/docsearch.js
docs/index.html
docs/link.svg
docs/pkgdown.css
docs/pkgdown.js
docs/pkgdown.yml
docs/reference/ASE_detection.html
docs/reference/differential_ASE_detection.html
docs/reference/index.html
docs/reference/modelFit.html
docs/reference/one_condition_analysis_Gene.html
docs/reference/phasing.html
docs/reference/plot_ASE.html
docs/reference/plot_ASE_diff.html
docs/reference/two_conditions_analysis_Gene.html
man/ASE_detection.Rd
man/differential_ASE_detection.Rd
man/modelFit.Rd
man/one_condition_analysis_Gene.Rd
man/phasing.Rd
man/plot_ASE.Rd
man/plot_ASE_diff.Rd
man/two_conditions_analysis_Gene.Rd
vignettes/data_onecondition.png
vignettes/data_twocondition.png
vignettes/introduction.Rmd
vignettes/real_data_example.txt
