MiXcan_extract_weight: Extract the gene expression prediction weights matrix Extract...
In JiayiJi/MiXcan:
Description
Usage
Arguments
Value
View source: R/MiXcan_extract_weight.R
Description
Extract the gene expression prediction weights matrix
Extract the gene expression prediction weights matrix (elastic net regression coefficients) from MiXcan() function.
The output can be directly applied to GWAS data for cell-type specific TWAS.
Usage
1
MiXcan_extract_weight(MiXcan_model)
Arguments
MiXcan_model
A direct output from MiXcan() function, which includes the
prediction weights as well as other summaries of the prediction models.
Value
A data frame with weight for cell 1 and 2, including the potential meta data for the SNP
JiayiJi/MiXcan documentation built on Dec. 18, 2021, 1:30 a.m.
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Description Usage Arguments Value
View source: R/MiXcan_extract_weight.R
Description
Extract the gene expression prediction weights matrix Extract the gene expression prediction weights matrix (elastic net regression coefficients) from MiXcan() function. The output can be directly applied to GWAS data for cell-type specific TWAS.
Usage
1 | MiXcan_extract_weight(MiXcan_model)
|
Arguments
MiXcan_model |
A direct output from MiXcan() function, which includes the prediction weights as well as other summaries of the prediction models. |
Value
A data frame with weight for cell 1 and 2, including the potential meta data for the SNP
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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