Man pages for JiayiJi/iProMix
Cell-Type Specific Association Analysis for Bulk Profiling Data
| EStep | E step of the EM algorithm: Calculate the expectation of Q... |
| iProMix | A decomposition model |
| iProMix.eFDR.PermAdd | FDR controlled iProMix identification with permutation-add... |
| iProMix.eFDR.PermReplace | FDR controlled iProMix identification with... |
| iProMix.LRT | Calculate the likelihood ratio test statistics (as well as... |
| iProMix.LRT.matrix | For Y matrix with multiple genes/proteins/variables,... |
| iProMix.PermAdd.LRT | iProMix.PermAdd.LRT |
| iProMix.PermAdd.LRT.matrix | For Y matrix, calculate the difference in likelihood ratio... |
| LL | Calculate the log likelihood function given parameters |
| MStep | M step of the EM algorithm: Update the parameter estimates... |
