| ASE.HMM | Dection of Differentially Allelic Expressed Regions (DAERs)... |
| data.prep | Pre-process and re-structurize the input data |
| data.trans | Initialize parameters |
| EM | The EM algorithm |
| Estep | The E-step in the EM algorithm |
| hello | Hello, World! |
| Mstep | The M-step in the EM algorithm |
| Region.Infer | Region Detection |
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