runSubcellulaRvis: Visualise subcellular enrichment

In JoWatson2011/shiny_subcellularvis: What the Package Does (One Line, Title Case)

Description

Visualise subcellular enrichment

Usage

runSubcellulaRvis(
  compsDat,
  colScheme_low,
  colScheme_high,
  trafficking = F,
  text_size = 2,
  legend = T,
  legend.pos = "right",
  labels = T
)

Arguments

compsDat	Output of compartmentData()
colScheme_low	Low value (i.e. most statistically ignificant) of colour scheme
colScheme_high	High value (i.e. most statistically significant) of colour scheme
trafficking	Logical; Visualise endolysosome system?
text_size	Size of text if using
legend	Logical; include legend?
legend.pos	passes to ggplot2::theme(legend.postion = legend.pos). One of "right", "left", "bottom", "top"
labels	show labels on plot? Default is TRUE

Value

ggplot2 object

JoWatson2011/shiny_subcellularvis documentation built on Dec. 18, 2021, 1:38 a.m.